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Exploring Phages at JGI
… As a first-generation college student, I never really entertained the possibility of working at a national laboratory. However, through the JGI-UC Merced internship program, … scientists and gained exposure to new and different opportunities that could be available once I complete my PhD …
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the … design and assembly, strain engineering and bioinformatic tool development/data analysis for synthetic biology and functional genomics. Prior to joining the JGI, he was a group lead at … with a view to developing a deeper understanding of sequence-based gene function. …
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Short sequence motifs, overrepresented in mammalian conserved non-coding sequences
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Better Genome Editing for Bioenergy
… team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a … Cas9 needs guide RNA to lead it to the correct sequence to snip — but not all guides are effective. To … This work was supported by DOE Joint Genome Institute grant  CSP-503076 (IW, HA, and MB) and …
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A Complex Confection Decoded: Sugarcane Reference Genome
… reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the … Community Science Program; in 2018, a monoploid reference sequence of sugarcane was published as a step forward in … No. DE-AC02-05CH11231 with Lawrence Berkeley National Laboratory. The work conducted at CIRAD was supported by the …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who … community, the VEGA symposium provides networking opportunities and fosters discussions on how to capture and …
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint … capabilities, large-scale data, and professional expertise to support the global research community in studies of … processed 13,700 metabolomics samples With our users, 247 publications were published   …
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements metagenomics studies. The … showed that single cell genomics can add significant value to the other commonly used culture-independent sequencing … snippets of microbial genomes directly from environmental sequence data, by piecing each genome together from large …
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Complete Genome Sequence of the Plant Growth-Promoting Endophyte Burkholderia phytofirmans Strain PsJN
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Complete Genome Sequence of Nitrosospira multiformis, an Ammonia-Oxidizing Bacterium from the Soil Environment▿ †
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Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section Nigri
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Complete Genome Sequence of the Thermophilic, Piezophilic, Heterotrophic Bacterium Marinitoga piezophila KA3
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