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Genome analysis of Desulfotomaculum kuznetsovii strain 17T reveals a physiological similarity with Pelotomaculum thermopropionicum strain SIT
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The Power of One, Amplified
… that species specific sets of single cells harbored mobile genetic elements that were missed within paired metagenome … of within species recombination, indicating variation in gene flow between the analyzed community members. The Impact … identified from microbial and metagenome sequence data sets generated from a handful of hot springs, including Dewar …
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Draft Genome Sequences of Chlamydiales Bacterium STE3 and Neochlamydia sp. Strain AcF84, Endosymbionts of Acanthamoeba spp.
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Dan Rokhsar
… the Physics Department and in 2002 he became a Professor of Genetics, Genomics and Development after his research … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, … Genomics and Computational Biology … Education … Selected Publications … Awards and Honors …
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Igor Grigoriev
Russia PhD in Molecular Biology, Research Institute for Genetics and Selection of Industrial Organisms, Moscow, … atlas of mushroom development reveals conserved genes behind complex multicellularity in fungi. Proc Natl … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …
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Frederik Schulz
… dimictic lake. Microbiome . Camargo A. et al. 2023. Identification of mobile genetic elements with geNomad. Nature Biotechnology . Schulz … academic achievements (2008) … Education … Selected Publications … Awards and Service …
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Doubling Down on Known Protein Families
… sequencing allows researchers to study the entire genetic makeup of these communities via whole genome … of the samples, without being able to distinguish which gene belongs to each individual microbial species within a … call “known knowns” — that is, they are similar to genes with known function. Others are called ‘known …
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JGI & KBase at PAG XXVII
Populus 8:03 PM Natural Diversity in  Setaria  and a Novel Gene for Shattering   In mid-2019, JGI and KBase will be …
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A Complex Confection Decoded: Sugarcane Reference Genome
… in  Nature by an international consortium. With the genetic code of sugarcane, researchers were able to map the location of genes that provide resistance to the brown rust disease that … reference sugarcane  genome , the JGI provides foundational genetic information that crop breeders can use to improve …
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Hiroshi Otani
Otani H, Mouncey NJ. RIViT-seq enables systematic identification of regulons of transcriptional machineries. … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… teems beneath your feet. Both bacteria and fungi have genes that can break down plant fibers. But are they both … sequences (transcriptomes) from their soil samples. This gene expression dataset was particularly important for characterizing fungal genes, because, unlike bacteria, they often carry …
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