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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental … tetranucleotide frequencies, and an area’s environment hosts particular organisms and metabolisms. This implies … of tetranucleotide frequency. This work connects microbiome genotypes to environmental conditions. Because they can take …
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The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome
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Identification of beneficial and detrimental bacteria impacting sorghum responses to drought using multi-scale and multi-system microbiome comparisons
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Metagenomics-resolved genomics provides novel insights into chitin turnover, metabolic specialization, and niche partitioning in the octocoral microbiome
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Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner
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Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems
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A telomere-to-telomere genome assembly resource of Bipolaris sorokiniana, the fungal pathogen causing spot blotch and common root rot diseases in barley and wheat
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth … know, [beep]ing the proverbial bed, right? Can we make that change and keep the ecosystem services intact that we need … could become more sustainable through applications of microbiome science; our water quality, our water resource …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately … communities in freshwater environments, the long-term ecological Harvard Forest project, large datasets from soil … AI models. I hope that the JGI will eventually not only host data, but also host these models — while helping its …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The … the case for  sphagnum as “an unparalleled model system for ecological and evolutionary genomics .” Understanding the … is critical to predicting the ecosystem response to climate change. Through the CSP, researchers are aiming to have two …
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