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Busting the Unbreakable Lignin
New evidence shows anaerobic fungi can degrade the hardiest of plant components … to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, … the entire landscape of biomass production and bioproduct engineering. Summary That organisms make use of cellulose …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … lab and second author on the paper, studied viral genetics and gene therapy before self-training himself as a …
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How Maize Makes An Antibiotic Cocktail
Maize produces a family of compounds that protects it against … revealed that just a handful of enzymes are needed to transform zealexins and related precursors into a bonanza of … They screened panels of hundreds of maize lines for genetic variation in the ability make zealexins, and …
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the … fungal natural products, O’Malley and her team plan to use genetic tools to boost production and isolate the compounds. …
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The Structure of CcmP, a Tandem Bacterial Microcompartment Domain Protein from the β-Carboxysome, Forms a Subcompartment Within a Microcompartment
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Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, on and around Earth … viruses are likely to infect, and (iii) identifying the genetic traits of the viruses to better understand their …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
With a new methodology, scientists are now getting more complete … the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but most … it’s difficult to link the connections to them from the genetic elements that scientists have found, e.g. plasmids …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome … of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral Genomics group … in natural ecosystems, and functionally explore viral genetic diversity.  In 2021, he was among those selected by …
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Detection of short-term cropping system-induced changes to soil bacterial communities differs among four molecular characterization methods
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Contrasting Community Assembly Forces Drive Microbial Structural and Potential Functional Responses to Precipitation in an Incipient Soil System
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