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Boosting Small Molecule Production in Super “Soup”
… products at volumetric productivities greater than the source strains. (Blake Rasor) Think of cells as tiny … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Game On: High School Students Drive Everglades Metagenomics Study
… the Florida Everglades to help train the next generation of scientists. She shares her thoughts about the experience … class at Florida’s Boca Raton Community High School. The course had a defined set of objectives, and started with an … Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science User Facility. She took special interest in it …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… Scientists have discovered that the candidate bioenergy … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered that the candidate … evolutionary consequences. A previous study conducted by our research team surveying the genomic and phenotypic …
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Taking Stock of the Known and Unknown Microbial Space
… global research community.  Published January 17, 2025 in Science Advances , researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … representation. “When it comes to isolate genome data, our real-world touchstones, we’re just scratching the …
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New and Improved: Eucalyptus Reference is Now Accessible
… to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with significant … published in 2014 by a team led by University of Pretoria scientists with help from researchers at the DOE Joint …
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Baltic Sea coastal sediment-bound eukaryotes have increased year-round activities under predicted climate change related warming
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Promoting the Power of Viral Metagenomics
… summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos Kyrpides , was  recently published in the journal  Annual Review of Biomedical Data Science . The following guest piece was written by Call, a … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts … of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, …
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Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… Congratulations to Susannah Tringe , one of eight scientists and engineers who received the 2020 Ernest … director of Berkeley Lab’s Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s …
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Genome Sequence of Porticoccus hydrocarbonoclasticus Strain MCTG13d, an Obligate Polycyclic Aromatic Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton
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