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Waiting to Respire
… of UC Berkeley geomicrobiologist Jill Banfield, a longtime JGI collaborator, postdoctoral fellow Paula Matheus … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and research … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… fundamental aspects of fern biology and, more broadly, land plant evolution. Recent findings in Ceratopteris richardii … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … ( Learn more about OGG in  this episode of to the JGI podcast Genome Insider . ) Summary A recent paper …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… flavor of wine, terpenes are ubiquitous. A diverse group of plant-produced organic compounds, terpenes play key roles in plant growth, defense, and environmental interactions. … proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI worked on resequencing several eucalypt genomes to …
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Building Wet and Dry Lab Skills
… Mikes worked with mentors Yi Zhai and John Vogel from the Plant Functional Genomics Group to study the effects of  … on to Dori – a computer cluster owned and operated by the JGI and Berkeley Lab – to launch a jupyter notebook running … Alabama A&M majoring in Biology, and I'm also an intern at JGI with Yi and Sharon. Yi Zhai : Hi, everyone. My name is …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … genomic capabilities. Summary In a project supported by the JGI Community Science Program, University of California (UC) …
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JGIota: Looking Back at Methane-Making Microbes
… from gut microbes — the bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial … producing things like meat, milk, and wool. Hear more from JGI collaborators Sinead Leahy (New Zealand Agricultural …
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A Model System for Perennial Grasses
… research programs for developing methods for converting plant biomass into sustainable fuels for cars and jets. By … including researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, report the … the candidate bioenergy crop, switchgrass. Through the JGI’s Community Science Program , JGI sequenced and …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … 10k samples/year, Dr. Louie and her team work with other JGI scientists in development of new, advanced mass …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a … to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  Nature … Blow, and their team have also harnessed CRAGE to create a plant-fertilizing microbiome. In work  reported in  Applied …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, … and it feels so rewarding,” Wint said. For Axel Visel, JGI Science Deputy and a co-founder of the internship … now in her final year of PhD research at UC Merced. She plans to continue expanding her understanding of mathematics …
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Yasuo Yoshikuni
… has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology … for non-model organisms, modulating microbe-microbe and plant-microbe interactions in various environments to … for building composite materials. Before joining the JGI, Dr. Yoshikuni was co-founder and chief science officer …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… weather events such as heat waves, droughts and floods. The planet’s resources are being stretched by a growing human … and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By …
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