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Single-cell genomics for the masses
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The dynamic genome of Hydra
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Genomics of alphaproteobacterial methylotrophs
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Genomics of wood-degrading fungi
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Bacterial Genome Annotation
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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Danielle Goudeau
Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … aim is identifying chemical compounds that could inhibit microbial methane production. Another effort is in using microbial understanding to formulate a vaccine for …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers … (IMG/M) database, they successfully crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Uri Neri
… viruses – though he'll take a look at anything related to microbial parasites. When not debugging pipelines, he can be …
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JGI on the 2020 Highly Cited Researchers List
… that led to the release of 52,515 publicly-available microbial draft genomes generated from environmental samples … to help researchers assess and improve the quality of metagenome-assembled viral genomes. The paper appeared in  … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
As SIP experiments shed more light on microbial communities than ever before — especially with the … easier to compare?” said Malmstrom, who worked with JGI Metagenome Program head Emiley Eloe-Fadrosh to host … this was the first workshop of its kind on SIP metagenomics,” Malmstrom said.  Increasingly, efforts like these …
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