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Fungi from herbivore poop make surprisingly complex compounds — an energetically … californiae , and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. …

A genetic architecture that is characteristic of the sex … distinguish males and females even when plants with multi-year generation times are young and haven’t physically … Foundation of China (31590821, 31561123001, 31500502, 41871044), National Key Research and Development Program of …

Nanohaloarchaeota cultures reveal they are symbionts and not … to that of a free-living organism. First discovered in 2011, Nanohaloarchaea are part of the DPANN (Diapherotrites, … outlined by JGI scientists and their collaborators in 2013. While most DPANN lineages are predicted symbionts, the …

For the first time, a team analyzes the transcriptomes of a lichen fungus and … that in this symbiosis going back hundreds of millions of years, accidental gene swaps via horizontal gene transfer … by a DOE-Biological Environmental Research grant No FWP 61327 to FRC and PL (for RNAseq). The work at the Joint Genome …

In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements …

A new view into a symbiosis could offer benefits to address … biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant … to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better …

A new view into a symbiosis could offer benefits to address … biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant … to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better …

Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key …

Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites … metabolism. … PhD in Chemistry, Johns Hopkins University (2003) MS in Chemistry, Johns Hopkins University (2000) BS in … (1996) … List available on Google Scholar … Education … Publications …

Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, … RiPP biosyntheses. J Ind Microbiol Biotechnol. 2023 Feb 17;50(1):kuad005.  Otani H, Udwary DW, Mouncey NJ. … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …

Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the … … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … List … of Cell Identity as an R package … Education … Selected Publications … Software …