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Dataset of 143 metagenome-assembled genomes from the Arctic and Atlantic Oceans, including 21 for eukaryotic organisms
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Genome Analysis Reveals Diversity and Functional Potential of Novel Janthinobacterium Species From Subarctic Soils
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science … perennial grasses using Panicum hallii (Hall’s panicgrass), by generating two complete genomes from varieties that diverged over a million years ago. The … The work conducted by the US Department of Energy Joint Genome Institute, a DOE …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… California (UC), Merced assistant professor Suzanne Sindi from the School of Natural Sciences and started a program … Jess Jarett, a postdoctoral fellow in Tanja Woyke’s Single Cells Group who mentored 2018 intern Akshay Paropkari, …
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Lost in translation: What we have learned from attributes that do not translate from Arabidopsis to other plants
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the … Lentinula   The Science Shiitake mushrooms get their name from the same place they often source their nutrients — the … at Lentinula samples from around the world. By complete sequencing of 24 new mushroom genomes, and assembling …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… one-third of human-created methane emissions actually come from livestock — specifically, from the methane-making … has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … different areas, beyond the project’s initial scope. Sequencing and culturing this vast collection of rumen …
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2024 Progress Report
… home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the … of products, making data easier to access and use, and by investing in the latest advanced genomic capabilities to … processed 13,700 metabolomics samples With our users, 247 publications were published   …
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome … Ian Blaby on Google Scholar Grosjean et al ., A hemoprotein with a … profiling of a synchronized diurnal transcriptome from Chlamydomonas reinhardtii reveals continuous cell and … al., Experimental evolution of a facultative thermophile from a mesophilic ancestor. Applied and environmental …
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Genome sequence of the palaeopolyploid soybean
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16S rRNA Gene Amplicon Sequencing Data from Flooded Rice Paddy Mesocosms Treated with Different Silicon-Rich Soil Amendments
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Benjamin Cole
… was primarily on how plants interpret different light cues by altering their growth program, and on how plants … In addition, Dr. Cole is focusing on how individual plant cells respond to their biotic environment using emerging single-cell characterization technologies (scRNA-seq, …
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