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… data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol Model (OPM) data management tools for scientific applications developed at Berkeley Lab. Dr. … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …

… participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing … data gathered from whole samples rather than single cells or isolated strains, is easy to generate, but … two vectors,” said Sevim.  While there are alignment-free methods for nucleotide searches, such as  Mash and  …

… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a previous effort, an international consortium recommended specific … available in the latest release of IMG/VR . CheckV is freely available for download at: …

… than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, … Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant professor Suzanne Sindi from … Jess Jarett, a postdoctoral fellow in Tanja Woyke’s Single Cells Group who mentored 2018 intern Akshay Paropkari, …

Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene … (1996) … List available on Google Scholar … Education … Publications …

Genome Institute dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha … science for JGI Plant Flagship Genomes and DOE relevant cellulosic feedstocks. Schmutz provides scientific project … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …