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Mateus Fiamenghi
Mateus’s research is focusing on the identification and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s GitHub …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a … zones identified SAR11 bacteria as initiators of nitrogen loss in these waters. The top image on the left shows how, … to experimental characterization and validation of the functional potential of these new lineages. …
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Eric Olo Ndela
Eric’s research is focusing on the development of new computational approaches to identify and characterize novel Mobile Genetic Elements. Eric’s GitHub …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Antonio Camargo
Antonio’s research is focusing on the development of new methods for the identification and classification of Mobile Genetic Elements from metagenomic data.  Antonio's GitHub …
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Arianna Krinos
Arianna is an affiliate research who explores the effect of aquatic protistan taxonomy and genetic diversity on physiology and ecosystem functioning through a combination of transcriptomic, …
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Understanding Wildfire Recovery, Starting in Soil
… a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … at microbial genomes across a spectrum of burned soils. By connecting microbial genes with functions useful for …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… diversity of large and giant viruses. While the microbes in a single drop of water could outnumber a small city’s … recent study  published in the journal  Nature , a team led by researchers at the U.S. Department of Energy (DOE) Joint … expanded 10-fold from just 205 genomes, redefining the phylogenetic tree of giant viruses. Metabolic Reprogramming a …
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get … a  genomic look at Lentinula samples from around the world. By complete sequencing of 24 new mushroom genomes, and … enzymes these fungi use to break down wood, and compares genetic diversity between cultivated and wild shiitake …
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Eelgrass Proves to Be Much Younger Than We Thought
The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around … a timeline like this, researchers would normally craft a genetic clock based on its divergence with a  different … carbon sink capabilities.  … This study was supported by a PhD scholarship from the China Scholarship Council to …
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Help from Citrus’ Bitter, Hardier Cousin
… to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never … annotating and analyzing the genome in order to find the genetic traits responsible for  P. trifoliata ’s hardiness, … secrets. This work builds upon JGI-supported research led by Gmitter and JGI’s Daniel Rokhsar, published over the last …
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