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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users … to examine microbial chemical production. The Science Soil bacteria in the genus Streptomyces are nature's … bacterium's entire metabolism for chemical production, the study provides a blueprint that engineers can use to design …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, we’ve covered …
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Frequently Asked Questions: Proposal Submission
… submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific details including project types supported, sample/capacity limits, … The CSP and FICUS calls are open to both domestic and international applicants from any institution type and at …
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JGI Workshop at SIMB NP Meeting
… Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a … and their biosynthetic logics to be understood, accessing these untapped metabolic capabilities is often tedious and resource intensive. This is often due to, for example, tight …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is … SAR324 exist in so many varied environments? Now, a recent study published in Microbiome has uncovered that SAR324 … sequenced community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), as well as the genomes of …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s … values, which guide the relationships we nurture in our workplace and seek to establish with our … the JGI user community and is responsible for providing input and advice on JGI policies and practices that …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes … to harvest all the energy they can. The results in the study were enabled by a number of  in vitro and  in vivo … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. … Biologist at the USDA for 12 years where he was a driving force behind the development of numerous genomic resources that … grass that is well suited to experimental manipulation in the laboratory because of its compact genome, diploid …
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JGI Accepts 17 Proposals for Community Science Program
… Monitoring Inter-Organism Interactions Within Ecosystems Latest … the University of Massachusetts Amherst and colleagues are studying how chronic warming is altering how microbes … interact with their environment, potentially accelerating soil carbon loss. Orange ribbons mark the heated plots and …
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