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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is … the power of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and … has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology …
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Forming Scientific Connections and Building Community
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three undergraduates and seven … : ”I really enjoyed meeting and getting to know many of the scientists that work here.” Mentor: Lorenzo Aureli Project: … who were able to give me some guidance in my academic journey.” Mentors: Deze Kong & Yasuo Yoshikuni Project: “ …
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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Boosting Small Molecule Production in Super “Soup”
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … able to make the same amount of a product in just eight hours that growing cells take three days to make, which is a …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from the 1000 … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … working to address some of the most pressing challenges of our time. For more information, please visit  …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms … a microbial mat from Cone Pool in Mono County, California, scientists have used sequencing methods for the first time … interactions. This work,  recently published in  The ISME Journal , by contrast, relied on methods that eschew …
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Community ecology across bacteria, archaea and microbial eukaryotes in the sediment and seawater of coastal Puerto Nuevo, Baja California
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… determination as they came onsite. From data carpentry to science communications, their schedules were filled with … skills, wet lab skills and overall connections. Theo Loureaux : I wanted to first discover new methods with tools … limited experience with, and to do so with some of the top scientists in that subfield.     Byline: Graham Rutherford …
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Atif Shahab
… led the development of an integrated platform for tracking JGI's sequencing projects and data warehousing. This platform streamlines project … at several renowned institutions, developing solutions for large-scale sequencing projects and data analysis pipelines.  …
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Mapping Heat Resistance in Yeasts
… for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers … Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence Berkeley National Laboratory, aim to improve our understanding of fungal diversity by sequencing genomes …
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The More the Merrier: Making the Case for Plant Pan-genomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … these datasets, researchers made a pan-genome containing four  B. hybridum  genomes and many  B. distachyon genomes. …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor … findings in the  Proceedings of the National Academy of Sciences . The team focused on the dominant bacterial clades … rectum, downstream of the ileum and similar to the human large intestine. Both bacterial clades can metabolize …
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