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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting … of the proposals. Upon approval from JGI reviewers, the DOE project managers review the proposals. The proposer of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute … specific procedure.” The rapport they built during this project and others (including the dissertation that preceded …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational … B.S. in Microbiology, Université Blaise Pascal, France M.S. in … Pascal, France Ph.D. in Bioinformatics, Ecology and Evolutionary Biology, Université Blaise Pascal, France …
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Matthew Kellom
… Matt is broadly interested in the interactions between microbial life and … places that are considered to be inhospitable to humans are of particular interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid with genome … analysis of microbial, fungal, and plant research projects.  More recently, these long-reads have been applied … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through … wetlands in south Texas,” he explained. “In terms of my project, I wanted to incorporate that CSP, but also look at …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an … prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in environments with … than 400 cultured rumen prokaryotes from the  Hungate1000 project . They also used the tool to predict possible …
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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Supporting FAIR Scientific Workflows with the JGI Analysis Workflow Service (JAWS)
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Integrating Experimentation with Data
…   Registration for this meeting has closed           Registration fees: … in Seattle, Washington.  Topics included:  Environmental Microbiomes Biodesign and Synthetic Biology AI/ML-enabled … national scientific user facilities dedicated to advancing research in bioenergy and environmental science. They …
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Triggering Morel Fruiting
… Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut National de la Recherche Agronomique (INRA) in France and Igor … source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every …
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Georg Rath
… Mr. Rath has been leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working on the boundary of life science and computational science … team is unbureaucratic and driven by code, without putting humans in the loop. He is a big proponent of empowering …
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