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JGI announces 2024 Functional Genomics awardees
… genomics research from reseachers who translate genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get … for  biofuel production. Additionally, these fungi play a role in the global  carbon cycle . As … Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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A Complex Confection Decoded: Sugarcane Reference Genome
… genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the … Development (CIRAD), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … The reference genome of R570 is available on the JGI plant data portal,  Phytozome .   …
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special … Otani is also a scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … user-available API’s offer a space to not just store data, but for the community to discuss those data and make …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… Sequencing technology has changed dramatically over the last  … climate. They may also provide a basic understanding of the roles microbiomes play in determining the behavior of the physical … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Steven Wilson
… Since 2018, Mr. Wilson has served as the Systems Engineering … of activities at JGI - proposal submission and review, project and work order creation and management, automated … of microbial/metagenomic assemblies, portals that make data available to the public, and our institutional website. …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in … science mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that …
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Georg Rath
… Mr. Rath has been leading the Systems Infrastructure Team at the JGI since 2020. … the chair of the Cluster Advisory Group (CAG), he sees his role as using the substrate provided by LBNL, where … team is unbureaucratic and driven by code, without putting humans in the loop. He is a big proponent of empowering …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the bench to … intern summer has closed at the U.S. Department of Energy (DOE) Joint Genome Institute, a DOE Office of Science User …
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The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome
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Identification of beneficial and detrimental bacteria impacting sorghum responses to drought using multi-scale and multi-system microbiome comparisons
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Metagenomics-resolved genomics provides novel insights into chitin turnover, metabolic specialization, and niche partitioning in the octocoral microbiome
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