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Plant genotype and rhizobia strain combinations strongly influence the transcriptome under heavy metal stress conditions in Medicago truncatula
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Eucalyptus grandis MYB‐Like and RAN‐Like Zinc Finger Proteins Display Dual Roles in Regulating Plant Immunity and Symbiosis Pathways
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Taking Stock of the Known and Unknown Microbial Space
… art of hands-on microbiology and experimental validation.  Microbes run the world, playing key roles in regulating … cycles. The information gained from understanding the interactions between microbes, hosts, and their environments could be applied to …
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A Natural Mechanism Can Turbocharge Viral Evolution
… how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The Science The … of how a fundamental mechanism of evolution — DGRs — allows microbes to adapt to changing environments. It also sheds … group at the JGI, thinks that if you’re a virus or a microbe with a DGR, you gamble every time you mutate. But, …
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Association mapping, transcriptomics, and transient expression identify candidate genes mediating plant–pathogen interactions in a tree
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RegTransBase – a database of regulatory sequences and interactions based on literature: a resource for investigating transcriptional regulation in prokaryotes
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Desert truffle genomes reveal their reproductive modes and new insights into plant–fungal interaction and ectendomycorrhizal lifestyle
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Extracting Protein-Protein Interactions (PPIs) from Biomedical Literature using Attention-based Relational Context Information
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Genome-wide fitness profiling reveals molecular mechanisms that bacteria use to interact with Trichoderma atroviride exometabolites
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BiG-SCAPE 2.0 and BiG-SLiCE 2.0: scalable, accurate and interactive sequence clustering of metabolic gene clusters
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First Monoploid Reference Sequence of Sugarcane
… now underway as part of the JGI Community Science Program (CSP), a critical factor in developing sugarcane as a … crop that very efficiently converts solar energy into plant biomass, which can then be crushed to extract the … in part on these positive results, in 2017, JGI approved a CSP proposal from the international team to complete the …
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Extracting the Secrets of Secondary Metabolites
… to integrate large genetic payloads directly into diverse microbes. Combining CRAGE with CRISPR provides researchers … researchers are no longer limited to using model host microbes; theoretically, any microbe can serve as the … edits affect functionality.  CRAGE allows for the transplanting of these BGCs from one organism into an alternate …
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