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DOE Metrics
…     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total … 2,208 102% *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total … DOE Quarterly Metrics Q1 – Report on new computational developments for improving microbial, metagenomic, or plant …
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How Maize Makes An Antibiotic Cocktail
… revealed that just a handful of enzymes are needed to transform zealexins and related precursors into a bonanza of … the protective function of zealexins and related compounds for other plants, including those cultivated for bioenergy. … pathway is simpler than scientists had suspected. A team  recently reported in  Nature Plants that the zealexin pathway …
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Triggering Morel Fruiting
Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following guest piece, JGI … of organic carbon nutrients into the surface soil adjacent from the exogenous nutrient supply, resulting in a …
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2022 Progress Report
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a … that colonizes Brock and gives him super strength. For lichen, the partnership is more commonplace — though … fixed carbon to the mycobiont. However, despite a century-and-a-half of lichen research, many of the …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an Assistant … Binghamton University in New York. He and Rokhsar have  recently published a Nature Communications paper that builds … arise when different ancestral species crossbreed before genome doubling. In allopolyploids, the set of …
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UC Merced Interns Reflect on Their JGI Summer Projects
… language processing techniques to categorize genetic information. Learn more about their work here in a series of … virtual events and technology enabled a fruitful experience for mentors and students alike. Tools like Slack, Google … career in genomics, and to help foster a diverse future workforce in science. Since the program’s inception, more than …
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Nick Everson
… the DOE Joint Bioenergy Institute and the Operations Deputy for LBNL’s Biological Systems & Engineering Division. Prior … to his tenure with Berkeley Lab, he served in the US Navy for 6 years as a submarine electrician and a financial … reviewer for DOE’s Science & Operations Peer Review of the Center for Functional Nanomaterials (CFN) at Brookhaven …
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JGI@25: Using Team Science to Build Communities Around Data
… a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference genomes for all fungi families — essentially, the foundation for an …
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Virus-Microbe Interactions of Mud Island Mangroves
… influence carbon cycling in coastal mangroves. His work centers on samples collected on Mud Island – “it’s … the SCGSR research experience was “an ideal opportunity for me to get real-world experience.” As he finalizes his … place. I am planning to enter the Boston biotech startup scene as a computational biologist. My primary future goal is …
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2025 NeLLi Symposium
Institute, the 2025 NeLLi Symposium delves into the most recent expansions of the Tree of Life and latest discoveries … computational advances, and other technological developments leveraging recent progress in AI/ML that will … Immediately following the NeLLi Symposium, join us for a 1.5-day jamboree on November 6-7 focused on improving …
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Tanja Woyke
… was the symbiont community of a gutless oligochaete for which she deciphered function and host-symbiont … Bigelow Laboratory for Ocean Sciences Single Cell Genomics Center (2013-current) Science Advisory Board Member for … 20: 721 Nayfach et al. 2021. A genomic catalog of Earth’s microbiomes. Nature Biotechnology 39, 499-509. Schulz et al. …
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