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The JGI Data Portal: Improving User Experience
Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is … all the data associated with the latest version of the plant portal, weren’t able to complete this task. Improving …
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A Grass Model to Help Improve Giant Miscanthus
… miscanthus often appear in discussions of rapidly growing plants whose biomass can be renewably converted into energy … Berkeley and the HudsonAlpha Center for Biotechnology. Most plants are diploids with two copies of each chromosome, one inherited from each parent. Some plants, known as polyploids, have more than two copies of …
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Training the Next Generation of Talent
Ben Cole on a project involving bacteria in Arabidopsis plant roots. At the same time, Lawrence worked with Nicole … how bacteria can be driven toward compounds produced by the plant roots. He is now working in Fabian Filipp’s lab, which …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
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A Grass Model to Help Improve Giant Miscanthus
… miscanthus often appear in discussions of rapidly growing plants whose biomass can be renewably converted into energy … Berkeley and the HudsonAlpha Center for Biotechnology. Most plants are diploids with two copies of each chromosome, one inherited from each parent. Some plants, known as polyploids, have more than two copies of …
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Data Policy
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Doubling Down on Known Protein Families
… the publicly available  Integrated Microbial Genomes & Microbiomes (IMG/M) database, they successfully crafted the …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
Rumen microbes have the ability to break down hardy plant cell walls and therefore hold clues to how humans … one of the challenges of developing alternative fuels from plants is the high cost and resource requirements of …
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Scaling Up Existing Skill Sets
… internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from … in Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has your summer … UC Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial Interactions What effect has your summer …
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FICUS Overview
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JGI Announces 2023 Community Science Program Awardees
CSP call had five areas of emphasis: genes to function, plant and algal functional genomics, inter-organismal …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… organisms may evolve.  Determining the genetic codes of plants is often challenging because in many plants chromosomes are present in more than two copies, a … of their ancestors. The method was tested on a number of plants, including  genomes of cotton lineages and the  …
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