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… with JGI scientists on research projects that contribute to the larger mission of the U.S. Department of Energy. Students also worked with their mentors to practice and develop presentation skills as well as … worked on ranged far and wide — from implementing new data visualization tools, to using natural language …

Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their biosynthetic logics to be … a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from …

… kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an esteemed … biology, single cell and systems biology, omics, and big data science, machine learning for experimental science, … are excited to continue our fruitful collaboration in the microbiome space that has resulted in many impactful papers …

… of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core … the relationships we nurture in our workplace and seek to establish with our stakeholders. The guiding principles … effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …

… -Mike Wilkins, Colorado State University GI users and microbiome researchers Mike Wilkins and his graduate student … communities deep underground, and before the pandemic, they took the JGI on a sampling field trip. One of the questions … published paper with first author Amundson in the journal Microbiome . The work builds off a proposal approved through …

… part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In … the soil towards the exogenous nutrient source. The opposite directions of carbon and nitrogen mobilizations not … . … Morel Mushrooms on MycoCosm Data Portal …

Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for comparative genomics and community annotation. …

… and Alabama A&M University piloted an internship program to bring students to the JGI for research training … of Brachypodium distachyon plant root exudates on the plant microbiome. They also took part in many enriching workshops … area surrounding the roots of a plant in the soil. And I’m specifically working with a grass plant that’s similar to …

… at the efforts of Pankaj Trivedi, whose New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to help make plants more resilient …

Research Institute, the 2025 NeLLi Symposium delves into the most recent expansions of the Tree of Life and latest … Dartmouth University … Metagenomic and single-cell sequence data have provided a means to access novel microbial … approaches to assign functional “read out” to sequence data. Moving from cataloging microbial diversity to …

The JGI welcomes three new members to their User Executive Committee (UEC) – Jack Gilbert, … efforts with diversity, equity and inclusion in mind. Microbiome ecologist Shade became Director of Research at … in access, analysis and sharing of JGI-generated data. She is also interested in reaching and engaging with …