Results

Transcriptional response of the white-rot fungus Dichomitus squalens to polysaccharides reveals a co-expression network of plant biomass conversion related genes
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The Exometabolome of Xylella fastidiosa in Contact with Paraburkholderia phytofirmans Supernatant Reveals Changes in Nicotinamide, Amino Acids, Biotin, and Plant Hormones
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Multilevel analysis between Physcomitrium patens and Mortierellaceae endophytes explores potential long‐standing interaction among land plants and fungi
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Plant genotype and rhizobia strain combinations strongly influence the transcriptome under heavy metal stress conditions in Medicago truncatula
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Eucalyptus grandis MYB‐Like and RAN‐Like Zinc Finger Proteins Display Dual Roles in Regulating Plant Immunity and Symbiosis Pathways
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Prokaryote Program User Advisory Committee
… scientific relevance and quality. The Committee does not perform management functions nor does it direct the Programs' …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… available data, GenomeOcean employs artificial intelligence for cutting-edge genomic research — and is capable of … Wang, a computational biologist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of … And since microbial genomes are simpler to model than large plant or animal genomes, they are a good starting point to …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… Scientists have discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its … of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … could be generating these observed patterns. As many other plant species have natural cytotype variation, we also hoped …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … genetic material with various origins, ranging from fungi, plants to bacteria. Back in 2011 when these genome and …
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Rex Malmstrom
… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever … high throughput approach for isolating individual bacterial cells and amplifying their genetic material, thus bypassing … the Microscale Applications group to operate a similar single-cell genomics pipeline that provides JGI users access …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  Environmental Molecular Sciences Laboratory (EMSL) , … State University, which archives and makes available for research over 100,000 samples and specimens of over 60 …
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Improving the Cacao Genome and Phytozome
… brands couldn’t exist without cocoa.  But today the plant is under threat due to climate change and devastating … infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest … with others to develop healthier and more productive cacao plants and ensure there will be cocoa for chocolate tomorrow …
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