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The Power of One, Amplified
A preview of how large-scale single cell genomics complements metagenomics studies. The Science Researchers demonstrated …
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Viral elements and their potential influence on microbial processes along the permanently stratified Cariaco Basin redoxcline
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The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar‐contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer
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JGI Scientists Pen Genome Watch Articles
… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … “Given the great expertise in microbial genomics and metagenomics of the microbiology-focused groups at the Joint … oxidizing archaea and what we’re learning about their metabolism . And postdoctoral researcher Sara Calhoun, data …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who … “Characterizing Virus-Driven Alterations of Microbial Metabolism in Model Soil Ecosystems,” uses a combination of …
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … development of multicellular organisms. Not all bacterial lineages harnessed aerobic respiration when the Cyanobacteria … groups may have been an anaerobe who relied on fermentative metabolism and hydrogenases. Click here to read the “Behind …
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What Happens Underground Influences Global Nutrient Cycles
… 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … them to better understand the impacts of drought on plant metabolism and particularly, what happens in the rhizosphere …
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JGI User Executive Committee Expands
… have been elected to the User Executive Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … CSP New Investigator proposal to understand the genetic basis of fungal community assembly on dead wood …
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … Natarajan Google Olga Zhaxybayeva Dartmouth University … Metagenomic and single-cell sequence data have provided a …
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” … plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … genomes to a diploid state while retaining multiple copies of some genes. This polyploidization process is ongoing and …
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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