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JGI at the AGU Fall Meeting
… This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in … Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … Expertise and Resources, Open-Call Opportunities, and Important Tips for Submitting Successful Proposals December …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, … to facilitate these efforts. Particular areas of emphasis will be the development of tools and …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … — between presence and participation — is especially important in microbial ecosystems. These communities harbor … analyses provide granular insight into microbial functions, traits and competition, illuminating the inner workings of …
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Charting Progress toward Professional Goals
… Select interns look back on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the … my group and different other people is that it's really important to know who you're talking to and, like, know your …
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Expanding Virophage Diversity
… are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages … in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … a global analysis of the diversity, distribution, and evolution of virophages.” Lead author David Paez-Espino  …
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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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A TXTL-Based Assay to Rapidly Identify PAMs for CRISPR-Cas Systems with Multi-Protein Effector Complexes
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Transcriptomic Analysis of the CAM Species Kalanchoë fedtschenkoi Under Low- and High-Temperature Regimes
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Rhythmic Mechanisms Governing CAM Photosynthesis in Kalanchoe fedtschenkoi: High-Resolution Temporal Transcriptomics
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately … genome discoveries. Unlocking the intricate details of life’s genetic blueprint has long been a significant challenge in … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Understanding Wildfire Recovery, Starting in Soil
… a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … DNA and messenger RNA (mRNA) sequencing to identify those traits that have helped fungi, bacteria and viruses survive. …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient … cycles and biogeochemical cycles…. Viruses play a pretty important role in the cycling of nutrients in these …
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