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UC Merced Interns Reflect on Their JGI Summer Projects
… Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with … far and wide — from implementing new data visualization tools, to using natural language processing techniques to … Intern: Sidharth Babu (undergraduate) Mentor: Zhong Wang Click the image …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural … Genome Institute in 2004. The main object of her research was the symbiont community of a gutless oligochaete for which she deciphered function and host-symbiont … Tanja Woyke is the Microbial Science Program Head as well as …
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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE JGI, UC … a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the University of California, Merced to … genome research and apply experimental and computation tools to solve research problems. In Visel’s group, Olmstead …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy Spencer Chair in … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding … strains of haloarchaea from different Antarctic lakes. To assess the genomic variation in haloarchaea, they also … cycles, and possibly cold-temperature enzymes for biotechnological use. Summary Conditions such as extreme …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … Response, Compensation, and Liability Act (CERCLA) was enacted by Congress in 1980 for Superfund sites which are … The work (proposal:  10.46936/10.25585/60000717 ) conducted by the U.S. …
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of … The 500 species described within the group are responsible for roughly two-thirds of antibiotics, and a deeper … other related organisms, requires using more specialized tools, skills and protocols,” explained Hiroshi Otani, an …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of … The bacterial endosymbiont, Burkholderia , is recognized as a mutualist, where both species of organism benefit from … in early fungi and discovered genes that are critical for this process. The Impact In the absence of the …
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River microbiomes from around the world: Kelly Wrighton
… Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive undertaking: sequencing the world’s river …
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