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… on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help … scientist Deanna Beatty sat down with interns hosted at the JGI through three different internship programs – some … Deanna Beatty, and I'm a genomic data scientist here at the JGI, and really happy to be here to talk with some of the …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … three strains of  Zygnema circumcarinatum . Published  May 2024 in  Nature Genetics by an international research … The algal genomes sequences are available on the JGI’s  PhycoCosm portal. …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Frontiers Group, the National Science Foundation (MCB-1244557 to J.A.D.) and the Lawrence Berkeley National … Focus Area funded by the US Department of Energy (DE-AC02-05CH11231 to J.F.B.). The work ( proposal doi: …

… mSystems paper , a team at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … activity in microbiomes. The initial analysis used over 12,000 metagenomes from diverse environments and grouped … data (the 136 tetranucleotide frequencies for each of the 12,063 metagenomes) and reduce it into two axes (LDA …

… communities, with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope … HT-SIP is a capability available to request through  the JGI proposal calls . … under the auspices of the U.S. DOE under Contract DE-AC52-07NA27344. The work conducted by the U.S. Department of …

… proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI worked on resequencing several eucalypt genomes to … tissues of C. citriodora . From these samples, a total of 127 TPS loci were found, many of which had high sequence … to TPS genes from other plants. Researchers reported 102 total putative functional TPS genes in C. citriodora, …

… metagenomic sequencing. A team co-led by Mária Džunková, postdoctoral researcher at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and archaeal cells — and detected the virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … virions (700 nm in diameter) to much smaller virions (120 nm in diameter). Across the phylum  Nucleocytoviricota , … approach for giant virus genomic discovery.  In 2020, a JGI-led team used this approach to deliver novel viral …

… utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, …

… and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user …

… , one of eight scientists and engineers who received the 2020 Ernest Orlando Lawrence Award , one of DOE’s highest … Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s Microbial Systems group. The award ceremony was held …

… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata …