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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
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A One-Stop Shop for Analyzing Algal Genomes
… place where you can browse the genetic blueprints of these photosynthetic organisms. PhycoCosm is one of the largest …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… the  Community Science Program (CSP) . This includes mass spectrometry-based measurements of primary and secondary … counts or biovolume? A: We typically use a measure of biomass, e.g. wet weight, total carbon analysis of the biomass, …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… mimicking an array of microbial life. By leveraging massive user-generated datasets at the JGI and other …
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You Can Move, But You Can’t Hide
… millions of new viruses and plasmids quickly, even in massive datasets. geNomad employs two distinct approaches to … of Energy Joint Genome Institute (https://ror.org/04xm1d337), and the National Energy Research Scientific Computing …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… continuously improved, but currently require input in the ~ 30 – 100ng range. Note that beyond quantity, input quality …
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Tracing the Evolution of Shiitake Mushrooms
… Researchers sequenced 11 samples from Asia–Australasia and 13 samples from the Americas to trace the evolution … samples was a global collaboration that brought together 39 researchers from eight different countries. Genome and … by the NSF awards DEB- 1456588 to D.H. and DEB-1442113 to A.R., the Department of Energy award 0000238431 to …
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Yasuo Yoshikuni
… as an environmentally sustainable and cost-effective biomass for production of renewable fuels and chemicals.  … pH in multiple Issatchenkia orientalis strains., Microbial Spectrum , 2024 Wu et al.Metabolic engineering of … Metabolic engineering for valorization of macroalgae biomass., Metabolic Engineering , 2022 Ke and Yoshikuni, …
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JGI at the AGU Fall Meeting
… User Facilities in One Proposal via FICUS December 13 8:12 am Convention Center eLightning Theater IV: Kuno … California” December 14 8:05am Convention Center, Rm 231-232: Josue Rodriguez-Ramos, Colorado State University (short …
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Mike Sneddon
… library and natural product discovery platform. WO2021163637A1 , PCT application PCT/US2021/018050 (published 2021). … Energy Systems Biology Knowledgebase. Nature Biotechnology 36, 566–569 (2018). Sneddon, MW, Pontius, W, and Emonet, T. … Selected Publications …
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John Vogel
… lines in an effort to create improved varieties for biomass production. He did his postdoctoral studies at the … Scarlett, et. al. 2023 Multiple origins, one evolutionary trajectory: gradual … lineages of allotetraploid Brachypodium. Genetics, 223 (2), art. no. iyac146 DOI: 10.1093/genetics/iyac146 …
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Waiting to Respire
… same clade as Cyanobacteria, applied strategies other than photosynthesis to gain and harness energy. As reported …
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