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… proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI worked on resequencing several eucalypt genomes to … tissues of C. citriodora . From these samples, a total of 127 TPS loci were found, many of which had high sequence … to TPS genes from other plants. Researchers reported 102 total putative functional TPS genes in C. citriodora, …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the virus had been infecting the cell. The team assembled 130 genomes from their sample — a small proportion of the … mat, the virus-to-host ratio for most pairs was close to 1. Even the most abundant virus was only 11 times more …

… University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … Selected Publications …

… 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab Director’s Award for Exceptional Achievement … T., Rübel, O., Keasling, J., Northen, T., & Bowen, B. (2017). OpenMSI Arrayed Analysis Toolkit: analyzing spatially …

… and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user …

… Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s Microbial Systems group. The award ceremony was held January 19, 2021. Learn more here in the Berkeley Lab story.   …

… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata …

… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database …

… with advanced computer skills. During the summer of 2016,  DOE CGSF recipient Adam Riesselman of Harvard University worked with DOE JGI's Sam Deutsch. Learn more about the DOE Computational …