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Micro-Scale Applications Group
… microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly link functional information with individual … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics … The JGI provides users access to cutting-edge cell sorting, DNA …
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MGM Workshop at Fisabio Summer School 2025
… Register here The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and related fields who are interested in learning …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… and Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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All Events
… The JGI is represented at conferences year round; find out where … presenting next. Learn about upcoming user-focused webinars and workshops we're hosting. …
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Virus-Microbe Interactions of Mud Island Mangroves
… his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science Graduate Student Research (SCGSR) program , which …
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Access to Rock Star Scientists
… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, Vicente Ramirez and … of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected … management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and impactful …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Creating an Energy Market for Miscanthus
… What grass is a prized ornamental and a bioenergy plant? Meet Miscanthus , an attractive addition to your garden … hear from scientists working on understanding Miscanthus biology and the economic terrain to help make the plant a …
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JGIota: The Algae Nicknamed ‘Chlamy’
… single-celled alga – Chlamydomonas reinhardtii – that’s managed to have a big impact. UC Berkeley plant biologist … a faculty scientist in the Environmental Genomics & Systems Biology Division of the Berkeley Lab Biosciences Area.] …
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial … Plant microbiomes hold the amazing ability to influence plant development, fitness and health. This is a dynamic and … including single-cell RNA-seq, single-cell ATAC-seq, and spatial transcriptomics to profile the …
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Counting dots or counting reads? Complementary approaches to estimate virus-to-microbe ratios
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