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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field … waters and sediment with collaborators at the Center for Scientific Research and Higher Education at Ensenada … ecology. We also know little about where to collect the California Cone Snail  Californiconus californicus (and cone …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate … it in the deep ocean. With genomic samples collected before, during and after The Blob, researchers developed a … in marine microbial communities. Using the JGI-generated data, Sachia Traving, a former postdoctoral fellow in the …
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Three Join the JGI User Executive Committee
… and Elizabeth “Lizzy” Wilbanks of the University of California, Santa Barbara. They join eight other JGI users … Society of America and is also a National Microbiome Data Collaborative (NMDC) Champion. As an early career … she is committed to representing and advocating for early career users on the UEC. As a user of the JGI and …
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Streamlining Regulon Identification in Bacteria
… regulation is critical to ensuring genes vital for growth and survival across various environments are expressed when their functions are needed. Data yielded through RIViT-seq expand the known … While characterizing sigma factors is the most straightforward application of the technology, in principle, …
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Busting the Unbreakable Lignin
… to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, … naturally modifying lignin.  The Impact Traditional methods for breaking down biomass use aerobic methods (those using … Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes …
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with 2 interns in the … the Lab. “This project represents part of our long term efforts to contribute towards a diverse workforce and scientific community (working with the JGI) as …
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Toward More Efficient Artificial Photosynthesis
Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation … A team led by researchers at the Max Planck Institute (MPI) for Terrestrial Microbiology and the University of Bordeaux have developed a platform that mimics chloroplast function within a cell-sized …
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Introducing New Members of the JGI User Executive Committee
… of members. Each of the researchers had their own reasons for wishing to serve on the UEC. For microbial ecologist Gilbert at the University of … in access, analysis and sharing of JGI-generated data. She is also interested in reaching and engaging with …
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2025 NeLLi Symposium
Immediately following the NeLLi Symposium, join us for a 1.5-day jamboree on November 6-7 focused on improving … genomics will work together to develop recommendations for cultivating new Bacteria and Archaea revealed by a … Dartmouth University … Metagenomic and single-cell sequence data have provided a means to access novel microbial …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… at the JGI’s history, from its beginnings in the sequencing for the Human Genome Project out to the future of the … in his 25th Anniversary presentation. “Those driven by new tools and those driven by new concepts.” Patrinos went on to … one second. “It isn’t just the generation of vast troves of data, it’s the new areas of scientific possibility that …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant professor Suzanne Sindi from … explained: “One of the hallmarks of JGI is our diverse workforce and our diverse collaborators around the world. That … early stages, so I can begin biological analysis of the data sooner than I anticipated.” In her message, Dumont …
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