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JGI Earth Month: Wetlands Work in #TenHundredWords
… of California (UC), Merced graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head of the Microbial Systems group … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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JGI-UC Merced Interns Share Their 2021 Experiences
… working virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and … for their PhD research. And for the first time in this program’s history, two interns returned to re-engage with … foster a diverse future workforce in science. To learn more about each intern’s experience during their internship, …
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DAS Tool for Genome Reconstruction from Metagenomes
… Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , researchers have developed and improved … functions in processes ranging from nutrient cycling to plant health and growth. Developing a scalable computational … The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in …
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
… Computational Science Graduate Fellowship (DOE CSGF) program was developed to meet the Nation's growing need for … University worked with DOE JGI's Sam Deutsch. Learn more about the DOE Computational Science Graduate Fellowship Program at http://www.krellinst.org/csgf/ . …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… now available to the global research community able to not just analyze but also create DNA sequences mimicking an array … And since microbial genomes are simpler to model than large plant or animal genomes, they are a good starting point to … sequences based on the principles it learns from the data about genetic structure — carrying with it the potential …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… (thermophilic) microbes are of interest for their potential use in number of biotechnological applications. Molecular … technology that enables researchers to generating thousands to millions of copies of a particular DNA sequence … and direct microscopy. Through the JGI’s Community Science Program , the team used metagenome assemblies, …
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JGI Hosts GPU Hackathon in May
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life … to the Team Proposal tab to submit. For more information about the 2019 GPU Hackathons, go to:  …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… established and emerging scientists from academia, industry, and government organizations for three days of … center talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your science. …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… technology has changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for … computing infrastructure and analysis. This way, JGI users — both primary, data-generating users, as well as … from this sample set through the Community Science Program, it was the largest project the JGI had ever put …
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements … genomics can add significant value to the other commonly used culture-independent sequencing approaches including … Robert Bowers , a JGI scientist within the Microbial Program, led the genomic analyses to compare the resulting …
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Improving the Cacao Genome and Phytozome
… brands couldn’t exist without cocoa.  But today the plant is under threat due to climate change and devastating … annotation was developing a high quality node for cacao used for systemic orthology to enable use for both cacao functional biology and breeding.     …
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Extracting the Secrets of Secondary Metabolites
… combo helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those … and other industries — yet there’s still so much about them we don’t know.  Unlocking the power of secondary … edits affect functionality.  CRAGE allows for the transplanting of these BGCs from one organism into an alternate …
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