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Promoting the Power of Viral Metagenomics
… Since early 2020, people all over the world have been forced to confront the awesome power that viruses have to affect nearly every aspect of our daily lives.  But for researchers who study viruses that infect organisms much … major roles in a vast range of globe-straddling phenomena. For example, viruses which infect the photosynthetic …
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Ben Bowen
… projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and chemistry for advanced analysis, modeling, and data integration. Dr. … in spectral alignment, molecular networking, chemoinformatics, and bioinformatics facilitates impactful …
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Forest Fungi, Seagrass, and a New View of Symbiosis
… Martin and Lucas Auer discuss their work on communities of forest floor fungi. Allison Joy looks into seagrass meadows' …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… Input & sequencing Q(uestion): How much DNA is needed for “regular” vs the ultra-low input library creation protocols for PacBio? A(nswer):  Regular PacBio typically requires ~ … high-molecular weight DNA) is an important factor as well for PacBio metagenomes. Q: How many PacBio metagenomes can I …
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The JGI Data Portal: Improving User Experience
… agile collaboration between the JGI and the information technology company Truss has resulted in the JGI … download processes from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome … and tools,” noted  Kjiersten Fagnan , JGI’s Chief Informatics Officer. JGI’s Portals, including Phytozome , IMG …
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Graduate Students Get Thesis Research Opportunity at the JGI
… to answer our most pressing problems. I’m very much looking forward to working with JGI and LBNL scientists and have … Lab is the home to an exceptional caliber of scientists.” For her project, “Microbial Community Structure and Methane … viral pressures on carbon cycling dynamics at the terrestrial-marine interface, which at a larger scale may be …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… challenges they overcame, and what new skill sets they look forward to taking back to school.  The interns from this … it just showed me when people have a goal and passion for it, it’s possible to do amazing things. And it made me … And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… on April 25.  On March 17, 2020, a shelter-in-place order for all residents took effect in six San Francisco Bay Area … statewide. In this brief captioned video, JGI Chief Informatics Officer Kjiersten Fagnan reflects on the personal … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… living on a changing planet. Mo Kaze is a University of California (UC), Merced graduate student working with  Susannah … Community Structure and Methane Production in California’s Canal System,” focuses on anthropogenic impacts on … on which she is expanding with her study of microbes in California’s manmade water transport canals. Inspired by Randall …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… the Community Science Program’s  Functional Genomics call for proposals .  On July 8, JGI’s DNA Synthesis Science … “I moved to UC Davis in 2014,” recalled Philipp Zerbe of the University of California, Davis. “The work with … instrumental in a lot of the work that we are doing now.” Zerbe’s proposal involving six labs at universities around …
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Mindfully Moving JGI
… Walnut Creek, after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a workforce that numbered more than 100 at its peak, all the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… a Single Proposal webinar, inviting researchers to apply for access to multiple genomics and molecular … more  here about the “Facilities Integrating Collaborations for User Science” (FICUS) program. Letters of Intent are due … 17, 2021. Q&A from the Webinar: Q(uestion): Who can apply for this proposal call? A(nswer): We work with people from …
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