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Depth-resolved paired metagenomes and metatranscriptomes from the Lake Erie ‘dead zone’
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … more than two copies, a condition known as polyploidy. The multiple copies arise from past genome duplication, which … came up with this new method, Session mentioned that the analysis for determining the evolutionary history of …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was led by researchers at two U.S. Department of Energy national user facilities – the DOE Joint Genome … of Illinois Urbana-Champaign, conducted technoeconomic analysis to determine if this technology might have value in …
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Genetic Analysis of Physcomitrella patens Identifies ABSCISIC ACID NON-RESPONSIVE, a Regulator of ABA Responses Unique to Basal Land Plants and Required for Desiccation Tolerance
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In silico analysis of the expression profile of AA9 Lytic Polysaccharide Monooxygenases (LPMOs) and the CDH Cellobiose Dehydrogenase enzyme in wood-degrader Agaricomycetes. The Pleurotus ostreatus case
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of … Walnut Creek and deciding on what was essential. There were multiple waste streams to consider, including unneeded … that would actually go to the landfill. Sorting required multiple speedpaks – large boxes with nearly a cubic yard of …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 Annual Meeting . The meeting was a hybrid … Her lab has leveraged bioinformatics in computational analysis to identify and characterize TEs, developing … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Genomic analysis of 94 SEMIA strains isolated from common bean nodules: species diversity and genes related to nodulation, nitrogen fixation, and tryptophan metabolism
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Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities
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Single-cell and metagenomic analyses indicate a fermentative and saccharolytic lifestyle for members of the OP9 lineage
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Impact of single-cell genomics and metagenomics on the emerging view of extremophile “microbial dark matter”
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