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Feature selection and causal analysis for microbiome studies in the presence of confounding using standardization
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Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics.
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Drought shifts sorghum root metabolite and microbiome profiles and enriches for pipecolic acid
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Tetranucleotide frequencies differentiate genomic boundaries and metabolic strategies across environmental microbiomes.
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Legacy Effects of Cropping System and Precipitation Influence the Core Camelina sativa Microbiome
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A bloom of a single bacterium shapes the microbiome during outdoor diatom cultivation collapse
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Conserved environmental adaptations of stream microbiomes in the hyporheic zone across North America
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JGI announces 2025 Functional Genomics awardees
… Woolston. ] Each year, the JGI accepts proposals for state-of-the-art functional genomics research from scientists who translate genomic … into biological function. Through our  CSP Functional Genomics call , we look for projects that will leverage the …
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MGM Workshop at Fisabio Summer School 2025
… Register here The workshop is addressed to students and professionals of biology, biomedical research, the health … and sharing concepts, tools and research results in genomics, metagenomics and the human microbiome. The workshop … training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia Ivanova and …
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Microbial Genomics & Metagenomics (MGM) Workshop
… Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This … familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational …
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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … are hybrids comprised of cotton A and cotton D genomes. A multi-institutional team including researchers at the U.S. … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … that they were indeed giant single cells rather than multicellular filaments, as is common in other large sulfur … the entire cell.” The JGI team then used single cell genomics to analyze five of the bacterial cells on the …
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