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Evolution of a Fungal Gene Expression Regulator
… date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can … which may help the pathogens evade a plant’s defenses. Understanding the role of transposons and 5mC in fungi could … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like it, are uncovering …
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Improving the Cacao Genome and Phytozome
… by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the … to a high quality modern standard and includes RNA-seq data. The improved  T. cacao Matina 1-6 genome is now … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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From Competition to Cooperation
… symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … generated by the JGI more than a decade ago. Having these datasets will assist researchers in moving toward functional …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… for users requiring multiple omics methods to examine microbial chemical production. The Science Soil bacteria in the genus Streptomyces are nature's … offers a template — integrative analysis of multiple omics data from various environments — that JGI users can leverage …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… sites designed to collect long-term open access ecological data to better understand how U.S. ecosystems are changing.  … the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  Environmental … (EMSL) , successful applicants can also access resources at NEON. This includes access to the NEON …
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UC Merced Interns Reflect on Their JGI Summer Projects
… Over the course of eight weeks this past summer, 10 students from UC … worked on ranged far and wide — from implementing new data visualization tools, to using natural language … genomics, and to help foster a diverse future workforce in science. Since the program’s inception, more than 30 …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… Michael Brandt (Operations Deputy), Horst Simon (Science Deputy), Jeff Blair (Chief Laboratory Counsel) and … in his event remarks. “I feel that is something crucial to our success, and Ray has been that. That person needs … efforts to ensure the JGI’s integration into the Biosciences Area, the successful recruitment of a new JGI …
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JGI@25: Studying Sorghum’s Survival Skills
… our collaborations and capabilities to enable great science that will help solve energy and environmental … However, neither crop shares sorghum’s hardiness, so understanding sorghum’s survival secrets could change not … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… held a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications Webinar inviting … Investigator call for proposals.  Tips: Contact us with your questions ([email protected]) Carefully read … to make sure the goals, experimental design, and plan for data utilization are clear. Contact JGI staff for feedback …
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IMG Webinar Series
… Find a series of webinars related to our Integrated Microbial Genomics & Microbiomes portal. …
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Peatland microbial community responses to plant functional group and drought are depth‐dependent
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Crysten Blaby-Haas
… engineering. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with … techniques, algae, and plants, while focusing on understanding the evolution and function of proteins … (2015) where she co-founded and led the Quantitative Plant Science Initiative (2017-2022), a BER Science Focus Area …
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