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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …
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An Integrated Dataset to Understand Ecosystem Interaction
… the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand … data set will help identify how different elements of the ecosystem interact and respond to changes in the … and small molecules produced by the trees and associated microbial communities. This revealed key metabolic pathways …
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David Goodstein
… focused on building tools to facilitate expert curation of human gene models in support of JGI’s contributions to … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine (www.intermine.org) … Education … Selected Publications … Awards and Service …
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JGI announces 2024 New Investigator portfolio
… is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel … under our Community Science Program . Below find a list of researchers whose proposals were accepted for 2024. … of desert grasslands to the metabolic savviness of microbial ecosystems at the forest floor and along ocean …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
Ancient  Chloroflexota s ditched their flagella and other traits when … to spring. These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The … diverse metabolic capabilities offer insights into how microbial processes might be harnessed for applications …
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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly … Animal Science and Molecular Biology & Genetics categories Microbial Systems research group lead and User Programs Deputy Susannah Tringe, Cross-Field category Microbial Program head Tanja Woyke , Biology & Biochemistry …
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Len Pennacchio
Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … technical JGI directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast … … About the Deputy of Genomic Technologies … Selected Publications … Awards and Honors …
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An Automated Tool for Assessing Virus Data Quality
… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … from IMG/VR , a database that is part of the Integrated Microbial Genomes & Microbiomes (IMG/M) suite, as well as …
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a … of Science User Facility. Y. lipolytica is a tantalizing microbial factory, capable of turning abundant biomass …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped … degradation.  “We are  very excited to see the outcome of the innovative research  being proposed by this year’s … CSP investigators,” said Tanja Woyke, Deputy Director of JGI’s User Programs. “Many of these projects are large in …
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Virus-Microbe Interactions of Mud Island Mangroves
… a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE … Rambo’s work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Biotechnology! Loretta Spencer served as a manyterm mayor of Huntsville, Alabama and is known for her contributions to … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … As well as the seminal Human Genome Project DOE Chromosome publications: The DNA sequence and biology of human …
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