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JGI announces first round of 2023 New Investigator awardees
… The JGI is eager to work and share our tools with a widening circle of researchers. The JGI is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. … plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … polyploids. Crop breeders have harnessed polyploidy to increase fruit and flower size, and confer stress tolerance …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to … a UF/IFAS professor of citrus breeding genetics and longtime JGI collaborator, are senior authors of the  recent … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, … his doctoral research in synthetic biology and microfluidics at the University of California, San Diego. As the Sequencing Technology … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in Molecular Biology, …
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Nigel Mouncey
… Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He has a wealth of managerial experience from almost 20 years in the … metabolites and synthetic biology. Dr. Mouncey has a long-standing interest in microbial genetics that started …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the … protocol for higher efficiency in Issatchenkia orientalis using electroportation and heat shock methods Asees Kaur …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … productivity across 1,100 miles and eight states. In 2021, using switchgrass samples from these gardens, a team led by … have adapted to a range of climates and environments. The long-term investments in both the genomics and gardens are …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science Researchers … model to study drought tolerance in perennial grasses using Panicum hallii (Hall’s panicgrass), by generating two … are causing extreme weather events, ranging from prolonged droughts to extended periods of very heavy rainfall …
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Fungus Fuels Tree Growth
… start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual lifestyle; it can thrive in the soil … larger by dry weight than without PM193  . By contrast, using a different endophytic fungus,  Ilyonectria europaea , …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data … (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … host organism. With the virus-host boundary clearly defined using functional annotation methods, it was possible to …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the … characterized from eucalypts, a group of 900 tree species belonging to the Myrtaceae (myrtle) family and containing the … are desirable from a biofuels production perspective. By using genomic database alignment tools, researchers searched …
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Party in the Rhizosphere
… There’s a party in the soil, and microbes are the VIPs. They’re feasting on the compounds that plants secrete through their roots, creating a lively zone called the … rhizosphere. In this episode, biologist Jennifer Pett-Ridge of Lawrence Livermore National Laboratory has your backstage …
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