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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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Genome‐wide association studies and expression‐based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense‐responsive transcription factors in Populus
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Exploring the Diversity of the American Prairie’s Switchgrass
… ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, …
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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Year in Review: JGI’s 2018 Progress Report Available Now
… is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, taken by JGI’s own Jon … and to better understand their roles in the global sulfur cycle. Copies are available online – click here to go …
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Understanding Wildfire Recovery, Starting in Soil
The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and … model and track the forest recovery process.  Summary Most studies on post-wildfire soil microbiomes have focused on …
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Laccase and Its Role in Production of Extracellular Reactive Oxygen Species during Wood Decay by the Brown Rot Basidiomycete Postia placenta▿ †
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A Natural Mechanism Can Turbocharge Viral Evolution
… dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” morphology, this means using proteins on its tail fibers to latch onto a specific target … or DGR. The DGR could mutate the virus’ tail fiber proteins, and thereby allow them to embrace different cells. …
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Genomic Characterization of Candidate Division LCP-89 Reveals an Atypical Cell Wall Structure, Microcompartment Production, and Dual Respiratory and Fermentative Capacities.
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… the June 2022 CROPS Conference at the HudsonAlpha Institute for Biotechnology. Phytozome is the Plant Comparative … facilitates accurate and insightful comparative genomics studies. …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… within their rumen. There is another climate-minded reason for studying rumen: Livestock live off plant matter, and … methane-emissions as well as efficient engineering of biofuels. Since 2010, the JGI has partnered with researchers … chemical compounds that could inhibit microbial methane production. Another effort is in using microbial …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications … carbon and nitrogen cycles, break down plant mass (think biofuels ), enhance plant health, cause diseases, and … publications ,” emphasized Markus Göker, who managed the production of genomic DNA at DSMZ for GEBA-Actino and …
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