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Methane Makers in Yosemite’s Lakes
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, Kaushal‘s mentor, described his student’s … biosamples in GOLD. “Besides these, he curated several small sets of phylogeny, biosample metadata tasks we … Partner summer interns at the JGI. What did you do for your summer vacation? …
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Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
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JGI-KBase Panel at SACNAS
… scientific contribution they make, whether as part of a course or internship, and before ever publishing a research … for anyone to get credit for their contributions to science. A panel of DOE researchers, program managers, and … students will learn how they can start using these resources to track their contributions to their benefit. …
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JGIota: The Algae Nicknamed ‘Chlamy’
This shorter episode is about a tiny, single-celled alga – Chlamydomonas reinhardtii – that’s … its genome, and what it has to teach us about other organisms – like plants. [ Editor’s Note: Merchant is also a … Genomics & Systems Biology Division of the Berkeley Lab Biosciences Area.] …
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about …
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SIPs with Standards
… catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible … multiple teams and analyses. This episode, Rex Malmstrom (JGI), and Roli Wilhelm (Purdue University), share a few …
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JGI-USCCN Strain Sequencing Opportunity
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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the …
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At the Forefront of Terrestrial Virus Research
Matthew Sullivan. He shared a few thoughts on his summer at JGI through a program that provides graduate thesis research …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile …
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