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Marine Synechococcus isolates representing globally abundant genomic lineages demonstrate a unique evolutionary path of genome reduction without a decrease in GC content
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Streamlining Regulon Identification in Bacteria
… transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … genes associated with a given transcription factor is resource-intensive and unscalable. To test the efficacy of …
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Plant Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …
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Secondary Metabolites Advisory Committee
… on the effective management and strategic objectives of the programs. The Committee serves as the Program's key external advisory panel and as advocates of Program strategy, operations, and scientific relevance … teams on how to operate and manage the particular Science Program. …
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Fungal & Algal Program User Advisory Committee
… & Algal Program Advisory Committee is chartered by the Science Program Heads and report back to them. The Committee … on the effective management and strategic objectives of the Program. The Committee serves as the Program's key external advisory panel and advocates of Program strategy, operations, and scientific relevance …
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An Automated Tool for Assessing Virus Data Quality
… assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and … (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… of Energy (DOE) Joint Genome Institute, a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced … the summer, three of the graduate student interns一Socheata Hour, Yibing Wang, and Brandon Imstepf一were selected to … opportunity to collaborate and network with talented scientists and staff at the JGI.” Listed below are the …
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Maureen Berg
… Maureen is currently developing new high-resolution and high-throughput methods to link … to their host. With these new methods, she hopes to expand our understanding of the roles that viruses play in their ecosystems, …
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Charting Progress toward Professional Goals
… on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help … program at UC Berkeley. Sally Liao came in through the DOE  Science Undergraduate Laboratory Internship program, while … important to know who you're talking to and, like, know your audience and cater what you're saying to the audience, …
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Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… internship experiences have influenced their careers in science. Hear more about what they learned from working with their JGI mentors, what challenges they overcame, and what new … the same problem. We can research on the internet and share our findings. And that was really important for me.  Tyrome …
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A Model System for Perennial Grasses
… hallii genomes offer insights to drought tolerance. The Science Researchers have developed a genomic model to study … including researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, report the … of nearly a decade of work to develop genomic resources for drought tolerance in perennial grasses. The team …
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