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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … transcriptome, epigenome and other functional genomics datasets generated by JGI user science projects. … BS in Biochemistry and Biological …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université Blaise Pascal, France Ph.D. in … with long standing virus-host interactions. The ISME Journal 15, 1569–1584. Nayfach et al., 2020. CheckV assesses …
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VEGA Symposium
Hosted by the JGI and co-organized with NIST,  the goal of the Viral … and industrial applications.  Thank you to all of our in-person and virtual attendees! Click here for the … Libusha Kelly , Albert Einstein College of Medicine JGI Organizers Simon Roux, Jonelle Basso, Maureen Berg, …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Defining the Sphagnum Core Microbiome across the North American Continent Reveals a Central Role for Diazotrophic Methanotrophs in the Nitrogen and Carbon Cycles of Boreal Peatland Ecosystems
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MGM Workshop at Fisabio Summer School 2025
… professionals of biology, biomedical research, the health sciences and related fields who are interested in learning … research results in genomics, metagenomics and the human microbiome. The workshop will train participants in … training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia Ivanova and …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … in Menlo Park, Calif. In the June 24, 2022, issue of the journal Science, Volland and colleagues, including …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable research and … lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were … by the JGI (isolates here , here and here ), and the data has been used to better understand arsenic mobility and …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine mutualism or … between some archaeal hosts and their hitchhikers. The Science Within the archaeal domain, there is a group of tiny … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Logos and Templates
The JGI Style Guide offers tips on JGI logo usage - please follow these guidelines. Logos JGI logo – stacked JGI logo – horizontal JGI logo – indicia …
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced … I got to work with an enormous set of fungal genomics data. For me, it was an opportunity to adapt my existing …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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