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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … 2015 JGI Annual Meeting:   Francis Martin on how JGI has changed mycology, excerpted from his talk at the 2015 JGI …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the terpene synthase gene family across eucalypt … abundant in the drier parts of Australia with lower quality soils and even in the desert areas with poor rainfall. That … Sequencing and assembly data carried out by EMBRAPA as part of the  Corymbia  genome project was supported by FAPDF …
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JGI & KBase at PAG XXVII
… your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January … genomic sequence information to BER-funded activities of plant systems that make use of these resources will … Highlights from Genome of Miscanthus 7:45 PM Transcriptome Changes during Leaf Senescence in  Populus 8:03 PM Natural …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with 2 interns in … was the feedback from the graduate student interns; “it changed what I want to do with my life,” “I can code.”  …
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JGI Hosts GPU Hackathon in May
… Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore … aren’t getting any smaller and we need to keep pace with changes in industry/DOE Advanced Scientific Computing …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter scenes that came with crayons in various shades of white. To researchers searching for sequences of RNA … all across the world and lead to cell death and/or profound changes in the cell physiology during infection.” While all …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
…   The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise … gene targeting in the genome in the November 2025 issue of The Plant Cell. Auxenochlorella is an allodiploid hybrid of two species, similar to a mule, but that is still able to …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … to monitor for and identify land use or water quality changes. Summary Rivers are key components of watershed …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  … paper , researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia … and environmental interests.  Summary As the planet has changed, so have plants. Curious about their ability to …
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JGI Announces 2025 New Investigator Portfolio
… You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel … accepted proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and … plant interactions across unique ecosystems, from alpine soils to tropical glaciers.  Proposals are accepted …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … challenges. Congratulations to Jennifer Doudna of the University of California (UC), Berkeley and Lawrence …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … a more straightforward way to connect genes and infer changes in gene function across the phylogeny — and link … Filling in the Plant Tree of Life …
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