Search

… Researchers looked across many organisms to see that … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … enzymes across 90 species. They queried the genomes of 15 species from each of six kingdoms: eubacteria, archaea, …

… A preview of how large-scale single cell genomics complements metagenomics studies. … In these springs, temperatures can reach as high as 80°C (~190°F), yet microbes thrive here. The communities in this … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… Harnessing BER-funded data resources, researchers built an … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … records of 8,350 organisms along with 4,355 genomes and 13.6 million genes. The results reveal that fermentative …

… CheckV can help researchers assess virus sequence fragments and data quality. … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … Additionally, CheckV was able to identify just over 17,000 contiguous sequences (contigs) of proviruses flanked …

… Novel archaeal lineage found in Yellowstone may have been important in early Earth conditions. The … into the evolution of life on Earth. For decades, longtime JGI collaborator Bill Inskeep of Montana State University … (gene expression), and direct microscopy. Through the JGI’s Community Science Program , the team used metagenome …

… For the first time, a team analyzes the transcriptomes of a lichen … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and his team at the JGI contributed to annotation of the genomes, available … This work was supported by an intramural seed grant (IGSP …

… Maize produces a family of compounds that protects it against infections … zealexins. Even though scientists have identified at least 15 zealexins, they suspect there are even more to find. … as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. …

… Select interns look back on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help … scientist Deanna Beatty sat down with interns hosted at the JGI through three different internship programs – some …

… Research uncovers the genetic foundations that helped plants conquer land … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The algal genomes sequences are available on the JGI’s  PhycoCosm portal. …

… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … This research was supported in part by the Allen Distinguished … Allen Frontiers Group, the National Science Foundation (MCB-1244557 to J.A.D.) and the Lawrence Berkeley National …

… Protein annotations provide insights into environmental tendencies The Science … mSystems paper , a team at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … activity in microbiomes. The initial analysis used over 12,000 metagenomes from diverse environments and grouped …

… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The … HT-SIP is a capability available to request through  the JGI proposal calls . … Work at Lawrence Livermore National Laboratory was conducted under the auspices of the U.S. DOE under …