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Making a Lichen Together
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and his team at the JGI contributed to annotation of the genomes, available …
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Refining the Process of Identifying Algae Biotechnology Candidates
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The Scenedesmus genome was sequenced and assembled at the JGI. Sara Calhoun in Igor Grigoriev’s team at the JGI led the multi-omics analysis effort for a more complete …
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A Collaboration to Improve Plant Genome Annotations Across Species
… improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently published work on the JGI Plant Gene Atlas in  Nucleic Acids Research . The … edited and condensed below.   Sarah Sharman:  What is the JGI Plant Gene Atlas? Avinash Sreedasyam:  JGI Plant Gene …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s Microbial Systems group. The award ceremony was held …
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The fungus that made itself at home
… from Europe, that was sequenced and analyzed by the JGI. The researchers found that S. lacrymans var. lacrymans …
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Honey Bee Gut Microbiota Divvy Up Dinner
… and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
… and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Computationally Classifying Fungal Lifestyles
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in Mycology . This work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved … as part of the 1000 Fungal Genomes Project supported by the JGI Community Sequencing Project # 662 . …
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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately identify mobile … approach. The tool was employed to build version 4 of the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 … To lower barriers to accessing and using geNomad, the JGI partnered with the NMDC to integrate this tool into the …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … for computational analysis of the AT enzyme family, the JGI provided DNA synthesis capabilities to enable functional … has allowed AT enzymes to evolve in complex ways.  Finally, to take a closer look at the functional redundancy …
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