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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… genome discoveries. Unlocking the intricate details of life’s genetic blueprint has long been a significant … various environments, including oceans, lakes, mammalian guts, forests, and soils, ensuring a robust and … 645.4 Gbp of high-quality contigs from diverse sources, derived from 219 Tb of raw environmental data. …
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Tonoplast sucrose transporter SUT4‐dependent sugar partitioning modulates phenological transitions and reproductive success in poplar
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … researchers previously applied this approach to uncover a novel group of giant viruses dubbed “Klosneuviruses.” … unicellular hosts,” Schulz added. The work also used resources of the  National Energy Research Scientific …
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Strain Engineering
… The focus of this group, in recent years, has been to bring … The developed strains represent an additional phase of user-accessible project types, in which DNA-based … chromosomally integrated into a taxonomically diverse suite of microbial chassis strains for elevated opportunity for …
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Synthetic Biology Informatics Group
… Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software includes: gRNA-SeqRET , an organism-agnostic CRISPR …
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Metabolomics Technology Group
… Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is understanding the distributed and …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … anywhere around the world can apply to access the JGI’s resources. Q:  Where can I get information for funding by JGI? … health is outside of JGI’s mission. However, analysis of novel secondary metabolites from plants could be a good.  …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … metabolism occurs in environments such as ruminant guts, sediments, and anaerobic bioreactors. Aside from …
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A Community Resource for Secondary Metabolite Researchers
… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … growth and reproduction—most organisms produce a set of "secondary metabolites," chemical compounds that often … publicly available bacterial and archaeal genome and contig sources.  The Impact Secondary metabolites are useful in a …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The … such as heat waves, droughts and floods. The planet’s resources are being stretched by a growing human population … relationship between plant roots and arbuscular mycorrhizal fungi (AMF), known to provide plants with nutrients and …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … and stimulate a bioeconomy, where renewable, biological resources drive processes, products, and services.  Advancing … multiple avenues, including agriculture, climate modeling, novel bioproducts, and environmental remediation—all …
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Styling for Safety: PPE, It’s the JGI Way
… Over the last few months, we found an increasing number of colleagues missing elements of the required PPE in the lab. To address this issue, we … to provide our colleagues with a visual representation of JGI PPE requirements. When working in the lab, it is … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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