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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, more and more virus sequences are being recovered and identified from environmental samples … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science …
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First Monoploid Reference Sequence of Sugarcane
… and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes … genomes are more difficult to sequence and assemble, in turn limiting the use of modern, genomic breeding in these crops. For … This work was supported by the International Consortium for Sugarcane Biotechnology, as …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing alga into a powerful platform for developing ​​bio-based … supported for his work on  Auxenochlorella genome sequencing and assembly in Berkeley, in part, through the Laboratory Directed …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are hermaphrodites, expressing both male … provided by the National Natural Science Foundation of China (31590821, 31561123001, 31500502, 41871044), National …
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Cultivating Symbiotic Antarctic Microbes
… cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed multiple … microbiology and ‘omics techniques to experimentally determine that Nanohaloarchaeota are symbionts, rather than free-living organisms as had been originally thought. The Impact The …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an esteemed interdisciplinary delegation from the University of … latest advancements in imaging-related technology and instrument-analytical methods.  “The microfluidic devices we …
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Graduate Students Get Thesis Research Opportunity at the JGI
… Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s lab at … a remarkable opportunity to launch a pilot project and begin the work of understanding how engineered environments contribute to greenhouse …
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Taking Stock of the Known and Unknown Microbial Space
… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research community.  Published … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in many regions due to more extreme weather events such as … This research was funded in part by DOE Grant DE-SC0014081 (to N.V., B.C., C.G., … Grant DE-SC0012460 (to M.J.H.). Work conducted by the DOE Joint Genome Institute is supported by the Office of Science …
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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