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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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Accelerating Metagenomics Discoveries with Deep Learning
… learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered from whole samples rather than … a computational biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating … in order to create more useful tools for the bioinformatics community. Other work presented at the workshop included how …
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Exploring Phages at JGI
As a first-generation college student, I never really entertained the possibility of working at a national laboratory. However, through the JGI-UC Merced internship program, I was able to collaborate with extraordinary … that could be available once I complete my PhD program. …
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The Case for Conservation
The genome assemblies highlight the multiple advances in sequencing technologies applied to the effort. The Impact … so rapidly in gene content and structure. He and JGI Plant Program head Jeremy Schmutz already see how lessons from … working with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind … to a more sustainable world. Learn about JGI-supported projects, delving into the researchers’ motivations, the …
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JGI@25: Stories from Intern Alumni
… anniversary . Over the next few months, we’ll be revisiting a number of notable achievements that showcase our … challenges. Over the past 25 years, the JGI has hosted interns from a number of universities and organizations. … wet lab experiments, to computational modeling and virtual projects, hear intern alumni Candace Cole, Alessandro …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research Molecular … al. 2014 Genome Diversity in Brachypodium distachyon : Deep Sequencing of Highly Diverse Inbred Lines 2014 Plant Journal …
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Ian Blaby
Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint Genome Institute, where he leads three groups focused on … 10, 2743-2769. 2015 Blaby et. al., The Chlamydomonas genome project: a decade on. Trends in plant science . 19: 10, …
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Predominant Acidilobus-Like Populations from Geothermal Environments in Yellowstone National Park Exhibit Similar Metabolic Potential in Different Hypoxic Microbial Communities
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Soil compartments (bulk soil, litter, root and rhizosphere) as main drivers of soil protistan communities distribution in forests with different nitrogen deposition
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, more … the completeness of these sequences and complements a community effort to develop guidelines and best practices … Biotechnology , a team from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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