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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their growth program, and on how plants coordinate their gene expression with light and …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… organisms may evolve.  Determining the genetic codes of plants is often challenging because in many plants chromosomes are present in more than two copies, a … developed a method to correctly identify polyploid subgenomes without needing to know the genomes of their …
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Trent Northen
… Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes … products. Proceedings of the National Academy of Sciences. 2021 May 4;118(18). https://doi.org/10.1073/pnas.2019855118 … metabolism in an anoxic wetland soil. Nat Commun. 2021 Apr 29;12(1):1-6. …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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JGI@25: Fueling Investigation into Methane-Making Microbes
… reason for studying rumen: Livestock live off plant matter, and their rumen are highly capable of breaking … has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … they called the Hungate1000, a catalog of 410 rumen microbe genomes. The project relied upon resources from laboratories …
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A Natural Mechanism Can Turbocharge Viral Evolution
… ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … these DGRs. DGRs were found in single microbial and viral genomes, as well as genomes sampled all at once from the same environment, … DE-AC02-05CH11231 through the Community Science Program (CSP), the G. Unger Vetlesen and Ambrose Monell Foundations, …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… and the use of laboratory resources. Capacity for the plant growth chamber is limited so that will have to be …
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Alabama A&M Interns Access An Abundance of Knowledge
… Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant microbiome. They also took part in many enriching … Alabama A&M University this fall for my master’s in plant soil science and my career focus is plant breeding. …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
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Bioenergy sorghum stem density increases threefold following internode elongation due to continued accumulation of lignified cell walls and complex regulation of genes involved in cell wall biosynthesis
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Complete Genome Sequence of Rahnella aquatilis CIP 78.65
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Exploring the Diversity of the American Prairie’s Switchgrass
… A tall native plant of the North American prairie, switchgrass ( Panicum … of scientists made an ambitious plan to begin to link the plant’s varying traits — height, biomass, hardiness to cold, …
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