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PhycoCosm Tutorial
… (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for data contextualization The … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … repositories, as well as project data entered by external users. The Impact One of the significant challenges in …
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“A STEM career is in reach and accessible”
… Notes from the Summer 2018 Biotech Partners Interns from Antioch High School. …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… and the Joint Genome Institute, a DOE Office of Science User Facility, built a chemiluminescent cyclic di-GMP … 1) complementation of split luciferase (CSL) and, 2) bioluminescence resonance energy transfer (BRET)-based … databases for homologous YcgR proteins and chose a set of 92 proteins for functional characterization as candidate …
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JGIota: Looking Back at Sequencing for Soybeans
… crop that could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence …
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2023 Progress Report
… Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, …
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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Streamlining Regulon Identification in Bacteria
… coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions is part of the … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … efficacy of RIViT-seq, researchers recently characterized 12 sigma factors and were able to identify the associated …
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A Collaboration to Improve Plant Genome Annotations Across Species
… of Energy (DOE) Joint Genome Institute (JGI)*, a national user facility located at Lawrence Berkeley National … plants did you all look at? Avinash: We started off with 12 plants, which are JGI Flagship Plants, mostly related to … we are looking at 18 different species, which included over 2000 RNA Seq libraries. As I previously mentioned, this is …
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JGIota: Looking Back at Methane-Making Microbes
… bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those …
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Picking Up Threads of Cotton Genomics
… All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in size, and are hybrids … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … lineages. Senior authors of the  paper published April 20, 2020 in  Nature Genetics include Jane Grimwood and …
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The Case for Conservation
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Study of Evolution Rosemary Grant Award to S.B.C.; NSF DEB-1239992 to N.J.W.; the Emil Aaltonen Foundation and the University …
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