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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Natural Prodcast Episode 19: Bill Fenical
… things I want to make sure that we talk about. You have a JGI project going with us that we want to talk a little bit about. It’s sort of early stages. But I think that is emblematic of some of the … So fortunately, the secondary metabolite component of the JGI, people are interested in this area. DAN UDWARY: I know …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… scientists usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … attempt to put them back into the original genomes. These metagenome-assembled genomes (MAGs) that came from shotgun …
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Cultivating Symbiotic Antarctic Microbes
… and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples …
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Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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IMG/VR
… JGI's Simon Roux describes the structure and content of the … of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage …
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Natural Prodcast Episode 15: Katherine Duncan
… exciting. And why chemistry is so far behind in that stage is it’s still really difficult to do natural products … structure information. You still need structure at this stage, and you still need to put that information into … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through … reinforced by the  Fort Lauderdale Agreement (2003), the JGI recognized the need to engage the community to inform necessary changes to JGI data policies. Since completion of the HGP, the JGI has …
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Soil virus offers insight into maintaining microorganisms
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … images of crystalized samples cloned and synthesized by the JGI, scientists have begun the complex process of uncovering … impact on the microbial communities within soil. Using metagenomics, scientists can shed light on hidden components, …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… symbiotic interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  … the microorganisms had a close relationship. Then, using metagenomes and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after presenting the results of his … the U.S. Department of Energy Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian … Natural Sciences (SNS). During his eight weeks at the DOE JGI, Olmstead saw a few familiar faces, one of them belonged …
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