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JGIota: Looking Back at Methane-Making Microbes
We count on livestock for food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions mainly come … microbes — the bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported researchers …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
The  National Ecological Observatory Network (NEON) is a network … staying up to date via our website, social media, and newsletter. Q:  How would people find out about the NEON Sample Protocols? A:  Go to the  NEON website and click on the Data …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) … Research Scientific Computing Center, the Molecular Foundry and the Advanced Light Source, future collaborative … projects were also intensively discussed. The Berkeley Synchrotron Infrared Structural Biology (BSISB) Program for the …
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in … research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to … Achievement, 2020 NIH Early Career Investigator Travel Fellowship, 2013 and 2012 ZoBell Fellowship, Scripps Institution …
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Polar Phytoplankton Need Zinc to Cope with the Cold
Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters of Antarctica, tiny ocean-dwellers called … time, they noted that the F. cylindrus genome encoded more proteins requiring zinc than non-polar algae. They …
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Viruses Reprogram Cells into Different Virocells
… be a duck. But if the duck gets infected by a virus so that it no longer looks or quacks like one, is it still a … For this project, RNA sequencing was done by the JGI, and proteomics and metabolomics analysis and microscopy at EMSL. … discretionary funds to MBD, an NSF Graduate Research Fellowship to MML (#DGE1256260), as well as a National Institutes …
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential … soil carbon. In high latitudes, sphagnum can also act as a protective layer insulating permafrost from the warming … Grant No PCIG14-GA-2013-630188 and Marie Skłodowska-Curie Grant No 660280), and the VILLUM FONDEN (research …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US … health is heavily reliant on the energy and nutrient flows that the microbes in these bodies of water help regulate. … 1,000 metagenomes and established standardized sequencing protocols so that researchers could compare results across …
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, … and their relationships with soil properties that co-vary with depth and with changes in warming and other …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, on and … to develop tools, curated databases, and streamlined workflows that allow researchers to easily analyze viral genomes. … institutions including the University of Maryland and Harvard University. The CODCC aims to coordinate data …
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JGI & KBase at PAG XXVII
XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. Stop by and chat with representatives from …
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Fishing for Novel Cellulose Degraders
… for fly fishing is a boxful of lures. Designed with feathers or wires to mimic an insect or a particular movement, … their functional roles in their community. This study shows how the function-driven, single-cell screen can uncover … the team then used DNA synthesis and cloning, followed by protein in vitro expression and mass spectrometry-based …
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