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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate change: pulling … cells, and both organisms rearrange their cells around this structure to facilitate sharing.  Recently, researchers have … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC Berkeley and work in … Igor Grigoriev is the Fungal & Algal Science Program Head at the JGI. Click to learn more about the … BA/MS in Biophysics, Moscow Engineering Physics Institute, Moscow, …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with … genes that can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential … the 5’-ends by 5’-end sequencing, from which those promoter sequences recognized by a given sigma factor are inferred. …
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Nigel Mouncey
… Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its … Nigel Mouncey is the Secondary Metabolites Program head as well as our JGI Director. Click to … The Director provides scientific and managerial guidance for all aspects of … Includes: Enhancing spinosyn production with oxygen binding proteins. (2014) U.S. Patent Application US8741603 …
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Synthetic Biology Lab
… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology applications group. … For further details, please reach out to the Group Lead …
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a wildfire. The Science … This work was supported through a USDA NIFA award (2021-67019-34608) to M.J.W. FTICR-MS … Leotiomycetes and Coniochaeata lignaria on MycoCosm Data portal …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have … bean (Phaseolus vulgaris) is actually a vital source of protein in many food-insecure countries around the globe, as … nutritional value, providing anywhere from 10-30% of daily protein requirements. It is also an essential source of iron …
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JGIota: Looking Back at Sequencing for Soybeans
… The soybean is a crop that could boost biofuels and fertilize fields. So in 2010, the JGI …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the … may tune gene expression; and investigate corresponding proteins. PhycoCosm’s built-in connection to the DOE Systems … Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired … industry. I really liked the fairly flat organizational structure, and found everyone to be welcoming and helpful. …
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